| Round | Overall | Player |
|---|---|---|
| 1 | 10th | 1B Carlos Delgado Tor |
| 2 | 15th | 2B Edgardo Alfonzo NYN |
| 3 | 34th | SP Greg Maddux Atl |
| 4 | 39th | RP Mariano Rivera NYA |
| 5 | 58th | SP David Wells ChA |
| 6 | 63rd | OF Bernie Williams NYA |
| 7 | 82nd | 3B Fernando Tatis Mon |
| 8 | 87th | SP Chuck Finley Cle |
| 9 | 106th | SS Barry Larkin Cin |
| 10 | 111th | OF Preston Wilson Fla |
| 11 | 130th | SP Orlando Hernandez NYA |
| 12 | 135th | OF Greg Vaughn TB |
| 13 | 154th | 3B Russ Davis SF |
| 14 | 159th | SP Rolando Arrojo Bos |
| 15 | 178th | 3B Ken Caminiti Tex |
| 16 | 183rd | 2B Fernando Vina StL |
| 17 | 202nd | SP Denny Neagle Col |
| 18 | 207th | 1B David Segui Bal |
| 19 | 226th | OF Ellis Burks Cle |
| 20 | 231st | SP James Baldwin ChA |
| 21 | 250th | C Brook Fordyce Bal |
| 22 | 255th | SP Shane Reynolds Hou |
| 23 | 274th | OF Gerald Williams TB |
| 24 | 279th | SP LaTroy Hawkins Min |
| 25 | 298th | SS Mark Loretta Mil |
| 26 | 303rd | OF Paul O'Neill NYA |
| 27 | 322nd | C Scott Hatteberg Bos |
| 28 | 327th | 1B Rico Brogna Atl |
| 29 | 346th | 3B Vinny Castilla Hou |