| Round | Overall | Player |
|---|---|---|
| 1 | 3rd | 1B Todd Helton Col |
| 2 | 22nd | 2B Edgardo Alfonzo NYN |
| 3 | 27th | C Jason Kendall Pit |
| 4 | 46th | OF Richard Hidalgo Hou |
| 5 | 51st | OF Larry Walker Col |
| 6 | 70th | SP Chan Ho Park LA |
| 7 | 75th | 1B Jim Thome Cle |
| 8 | 94th | RP Ugueth Urbina Mon |
| 9 | 99th | SP Kevin Millwood Atl |
| 10 | 118th | RP Curt Leskanic Mil |
| 11 | 123rd | 3B Adrian Beltre LA |
| 12 | 142nd | SP Jeff D'Amico Mil |
| 13 | 147th | OF Ben Grieve TB |
| 14 | 166th | SP Brad Radke Min |
| 15 | 171st | OF Ellis Burks Cle |
| 16 | 190th | SP Dave Burba Cle |
| 17 | 195th | SP Bruce Chen Phi |
| 18 | 214th | 2B Quilvio Veras Atl |
| 19 | 219th | SP Kenny Rogers Tex |
| 20 | 238th | SP Carl Pavano Mon |
| 21 | 243rd | SS Cristian Guzman Min |
| 22 | 262nd | 1B Lee Stevens Mon |
| 23 | 267th | 3B Aaron Boone Cin |
| 24 | 286th | OF Gabe Kapler Tex |
| 25 | 291st | SP Cal Eldred ChA |
| 26 | 310th | OF Juan Encarnacion Det |
| 27 | 315th | C Brent Mayne Col |
| 28 | 334th | SS Geoff Blum Mon |
| 29 | 339th | RP Wade Miller Hou |