| Round | Overall | Player |
|---|---|---|
| 1 | 1st | SS Alex Rodriguez Tex |
| 2 | 24th | SP Kevin Brown LA |
| 3 | 25th | OF Brian S. Giles Pit |
| 4 | 48th | 2B Ray Durham ChA |
| 5 | 49th | SP Curt Schilling Ari |
| 6 | 72nd | 3B Phil Nevin SD |
| 7 | 73rd | SP Livan Hernandez SF |
| 8 | 96th | OF Geoff Jenkins Mil |
| 9 | 97th | RP Danny Graves Cin |
| 10 | 120th | OF Luis Gonzalez Ari |
| 11 | 121st | OF Preston Wilson Fla |
| 12 | 144th | OF Lance Berkman Hou |
| 13 | 145th | SP Jon Lieber ChN |
| 14 | 168th | SP Andy Ashby LA |
| 15 | 169th | SP Matt Morris StL |
| 16 | 192nd | C Brad Ausmus Hou |
| 17 | 193rd | SP Woody Williams SD |
| 18 | 216th | SP Sidney Ponson Bal |
| 19 | 217th | SP Shane Reynolds Hou |
| 20 | 240th | 1B Kevin Young Pit |
| 21 | 241st | OF Rusty Greer Tex |
| 22 | 264th | DH Jose Canseco Ana |
| 23 | 265th | SP LaTroy Hawkins Min |
| 24 | 288th | SS Ricky Gutierrez ChN |
| 25 | 289th | SP Brian Moehler Det |
| 26 | 312th | 3B Todd Zeile NYN |
| 27 | 313th | C Tyler Houston Mil |
| 28 | 336th | 3B Cal Ripken Bal |
| 29 | 337th | 2B Homer Bush Tor |