| Round | Overall | Player |
|---|---|---|
| 1 | 11th | 3B Troy Glaus Ana |
| 2 | 14th | SP Randy Johnson Ari |
| 3 | 35th | 1B Rafael Palmeiro Tex |
| 4 | 38th | OF Juan Gonzalez Cle |
| 5 | 59th | OF Darin Erstad Ana |
| 6 | 62nd | SP Darryl Kile StL |
| 7 | 83rd | RP John Rocker Atl |
| 8 | 86th | C Darrin Fletcher Tor |
| 9 | 107th | RP Todd Jones Det |
| 10 | 110th | SP Jeff Weaver Det |
| 11 | 131st | OF Jeromy Burnitz Mil |
| 12 | 134th | DH Brad Fullmer Tor |
| 13 | 155th | OF Carlos Beltran KC |
| 14 | 158th | SP Dustin Hermanson StL |
| 15 | 179th | SS Mike Bordick Bal |
| 16 | 182nd | SP Kevin Appier NYN |
| 17 | 203rd | 3B Dean Palmer Det |
| 18 | 206th | OF Matt Lawton Ret |
| 19 | 227th | SP Jamie Moyer Sea |
| 20 | 230th | 2B Randy Velarde Tex |
| 21 | 251st | 1B Derrek Lee Fla |
| 22 | 254th | SS Mark Loretta Mil |
| 23 | 275th | 2B Ron Belliard Mil |
| 24 | 278th | C John Flaherty TB |
| 25 | 299th | SP Esteban Loaiza Tor |
| 26 | 302nd | OF Matt Stairs ChN |
| 27 | 323rd | SP Chris Holt Det |
| 28 | 326th | SP Mark Redman Min |
| 29 | 347th | SP Brian Tollberg SD |