| Round | Overall | Player |
|---|---|---|
| 1 | 10th | OF Vladimir Guerrero Mon |
| 2 | 15th | SS Miguel Tejada Oak |
| 3 | 34th | C Jorge Posada NYA |
| 4 | 39th | 1B Rafael Palmeiro Tex |
| 5 | 58th | 3B Fernando Tatis Mon |
| 6 | 63rd | 2B Craig Biggio Hou |
| 7 | 82nd | SP Roger Clemens NYA |
| 8 | 87th | OF Raul Mondesi Tor |
| 9 | 106th | DH Andres Galarraga Tex |
| 10 | 111th | SP Chuck Finley Cle |
| 11 | 130th | RP Bob Wickman Cle |
| 12 | 135th | SP Rick Helling Tex |
| 13 | 154th | OF Ichiro Suzuki Sea |
| 14 | 159th | OF Steve Finley Ari |
| 15 | 178th | SP Mark Mulder Oak |
| 16 | 183rd | RP Tom Gordon ChN |
| 17 | 202nd | SP Kenny Rogers Tex |
| 18 | 207th | SP LaTroy Hawkins Min |
| 19 | 226th | OF Rusty Greer Tex |
| 20 | 231st | SP C.C. Sabathia Cle |
| 21 | 250th | SP Ryan Kohlmeier Bal |
| 22 | 255th | 1B Derrek Lee Fla |
| 23 | 274th | OF Dmitri Young Cin |
| 24 | 279th | SS Melvin Mora Bal |
| 25 | 298th | C Einar Diaz Cle |
| 26 | 303rd | OF Paul O'Neill NYA |
| 27 | 322nd | SP Ismael Valdez Ana |
| 28 | 327th | 2B Homer Bush Tor |
| 29 | 346th | 3B Scott Brosius NYA |