| Round | Overall | Player |
|---|---|---|
| 1 | 2nd | 1B Todd Helton Col |
| 2 | 23rd | RP Mariano Rivera NYA |
| 3 | 26th | OF Ichiro Suzuki Sea |
| 4 | 47th | RP Kazuhiro Sasaki Sea |
| 5 | 50th | SP Barry Zito Oak |
| 6 | 71st | OF Bernie Williams NYA |
| 7 | 74th | SP Roger Clemens NYA |
| 8 | 95th | 1B Mo Vaughn NYN |
| 9 | 98th | SP Chan Ho Park Tex |
| 10 | 119th | 3B Jose Valentin ChA |
| 11 | 122nd | SP Brad Penny Fla |
| 12 | 143rd | OF Juan Pierre Col |
| 13 | 146th | C Javy Lopez Atl |
| 14 | 167th | 3B Mike Lowell Fla |
| 15 | 170th | 2B Luis Castillo Fla |
| 16 | 191st | OF Tim Salmon Ana |
| 17 | 194th | SP Hideo Nomo LA |
| 18 | 215th | 1B Dmitri Young Det |
| 19 | 218th | 3B Vinny Castilla Atl |
| 20 | 239th | OF Roger Cedeno NYN |
| 21 | 242nd | SS Jose Hernandez Mil |
| 22 | 263rd | SP Jason Bere ChN |
| 23 | 266th | OF David Justice Oak |
| 24 | 287th | 2B Luis Rivas Min |
| 25 | 290th | SP James Baldwin Sea |
| 26 | 311th | SS Neifi Perez KC |
| 27 | 314th | OF Vernon Wells Tor |
| 28 | 335th | SP Jim Parque ChA |
| 29 | 338th | C Jason LaRue Cin |