| Round | Overall | Player |
|---|---|---|
| 1 | 5th | SP Randy Johnson Ari |
| 2 | 20th | 3B Troy Glaus Ana |
| 3 | 29th | SP Curt Schilling Ari |
| 4 | 44th | SP Roy Oswalt Hou |
| 5 | 53rd | OF Adam Dunn Cin |
| 6 | 68th | RP Ugueth Urbina Bos |
| 7 | 77th | RP Bob Wickman Cle |
| 8 | 92nd | OF Carlos Beltran KC |
| 9 | 101st | OF Pat Burrell Phi |
| 10 | 116th | SS Cristian Guzman Min |
| 11 | 125th | OF Raul Mondesi Tor |
| 12 | 140th | 2B Marcus Giles Atl |
| 13 | 149th | SP Tony Armas Jr. Mon |
| 14 | 164th | 1B Fred McGriff ChN |
| 15 | 173rd | SP Kazuhisa Ishii LA |
| 16 | 188th | C Ben Petrick Col |
| 17 | 197th | SS Edgar Renteria StL |
| 18 | 212th | SP Juan Cruz ChN |
| 19 | 221st | SP Joel Pineiro Sea |
| 20 | 236th | 1B Erubiel Durazo Ari |
| 21 | 245th | OF Jeremy Giambi Oak |
| 22 | 260th | DH David Ortiz Min |
| 23 | 269th | C Mitch Meluskey Det |
| 24 | 284th | 3B Fernando Tatis Mon |
| 25 | 293rd | 2B Frank Menechino Oak |
| 26 | 308th | SP Rick Ankiel StL |
| 27 | 317th | SP Erik Hiljus Oak |
| 28 | 332nd | RP Vicente Padilla Phi |
| 29 | 341st | SP Nick Neugebauer Mil |