| Round | Overall | Player |
|---|---|---|
| 1 | 10th | OF Manny Ramirez Bos |
| 2 | 15th | SP Pedro Martinez Bos |
| 3 | 34th | 1B Rafael Palmeiro Tex |
| 4 | 39th | SS Miguel Tejada Oak |
| 5 | 58th | RP Trevor Hoffman SD |
| 6 | 63rd | 3B Aramis Ramirez Pit |
| 7 | 82nd | SP Javier Vazquez Mon |
| 8 | 87th | RP Billy Koch Oak |
| 9 | 106th | OF Johnny Damon Bos |
| 10 | 111th | C Mike Lieberthal Phi |
| 11 | 130th | RP Matt Anderson Det |
| 12 | 135th | OF Shannon Stewart Tor |
| 13 | 154th | SP David Wells NYA |
| 14 | 159th | OF Todd Hollandsworth Col |
| 15 | 178th | 2B Eric Young Mil |
| 16 | 183rd | 1B Fred McGriff ChN |
| 17 | 202nd | SP Mike Hampton Col |
| 18 | 207th | OF Bob Higginson Det |
| 19 | 226th | SP Brandon Duckworth Phi |
| 20 | 231st | 3B Vinny Castilla Atl |
| 21 | 250th | SS Omar Vizquel Cle |
| 22 | 255th | OF Russ Branyan Cle |
| 23 | 274th | 2B Pokey Reese Pit |
| 24 | 279th | C Raul Casanova Mil |
| 25 | 298th | SP Scott Erickson Bal |
| 26 | 303rd | 1B Eric Karros LA |
| 27 | 322nd | OF Gabe Kapler Tex |
| 28 | 327th | SP Kirk Rueter SF |
| 29 | 346th | RP Vicente Padilla Phi |