| Round | Overall | Player |
|---|---|---|
| 1 | 5th |
SS
Nomar Garciaparra
|
| 2 | 20th |
3B
Scott Rolen
|
| 3 | 29th |
RP
Mariano Rivera
|
| 4 | 44th |
1B
Phil Nevin
|
| 5 | 53rd |
RP
Trevor Hoffman
|
| 6 | 68th |
SP
Mark Mulder
|
| 7 | 77th |
C
Jason Kendall
|
| 8 | 92nd | OF Cliff Floyd |
| 9 | 101st |
SP
Wade Miller
|
| 10 | 116th |
OF
Shannon Stewart
|
| 11 | 125th | SP Kazuhisa Ishii |
| 12 | 140th |
OF
Jose Cruz Jr
|
| 13 | 149th | SP Ryan Dempster |
| 14 | 164th | SP Brad Penny |
| 15 | 173rd |
OF
Carlos Lee
|
| 16 | 188th |
SP
Roy Halladay
|
| 17 | 197th |
2B
Eric Young
|
| 18 | 212th |
SP
Tony Armas Jr.
|
| 19 | 221st |
3B
Dean Palmer
|
| 20 | 236th |
SP
Jason Marquis
|
| 21 | 245th |
OF
Bubba Trammell
|
| 22 | 260th | 1B Eric Karros |
| 23 | 269th |
2B
Mike Young
|
| 24 | 284th |
SS
Tony Womack
|
| 25 | 293rd |
SP
Miguel Batista
|
| 26 | 308th |
C
Michael Barrett
|
| 27 | 317th |
RP
Eddie Guardado
|
| 28 | 332nd |
OF
Austin Kearns
|
| 29 | 341st |
SP
Sidney Ponson
|