| Round | Overall | Player |
|---|---|---|
| 1 | 1st | SS Alex Rodriguez Tex |
| 2 | 24th | SP Curt Schilling Ari |
| 3 | 25th | SP Mike Mussina NYA |
| 4 | 48th | C Jorge Posada NYA |
| 5 | 49th | OF Moises Alou ChN |
| 6 | 72nd | 2B Eric Young Mil |
| 7 | 73rd | 3B Jeff Cirillo Sea |
| 8 | 96th | SP Al Leiter NYN |
| 9 | 97th | OF Shannon Stewart Tor |
| 10 | 120th | 1B Fred McGriff ChN |
| 11 | 121st | 2B Craig Biggio Hou |
| 12 | 144th | OF Garret Anderson Ana |
| 13 | 145th | C Charles Johnson Fla |
| 14 | 168th | SP Tony Armas Jr. Mon |
| 15 | 169th | SS Omar Vizquel Cle |
| 16 | 192nd | OF Bob Higginson Det |
| 17 | 193rd | 1B John Olerud Sea |
| 18 | 216th | SP Joel Pineiro Sea |
| 19 | 217th | SP Bruce Chen NYN |
| 20 | 240th | OF Kenny Lofton ChA |
| 21 | 241st | 3B Vinny Castilla Atl |
| 22 | 264th | SP James Baldwin Sea |
| 23 | 265th | OF Doug Glanville Phi |
| 24 | 288th | 2B Jose Macias Det |
| 25 | 289th | OF Frank Catalanotto Tex |
| 26 | 312th | C Dan Wilson Sea |
| 27 | 313th | 3B Chris Stynes ChN |
| 28 | 336th | SP Tanyon Sturtze TB |
| 29 | 337th | SP Glendon Rusch Mil |