| Round | Overall | Player |
|---|---|---|
| 1 | 8th | OF Vladimir Guerrero Mon |
| 2 | 17th | 2B Roberto Alomar NYN |
| 3 | 32nd | OF Magglio Ordonez ChA |
| 4 | 41st | SP Matt Morris StL |
| 5 | 56th | SS Jimmy Rollins Phi |
| 6 | 65th | 1B Jim Thome Cle |
| 7 | 80th | 3B Corey Koskie Min |
| 8 | 89th | RP Jason Isringhausen StL |
| 9 | 104th | SP Mark Buehrle ChA |
| 10 | 113th | OF Mike Cameron Sea |
| 11 | 128th | RP Matt Anderson Det |
| 12 | 137th | SP Jeff Weaver Det |
| 13 | 152nd | SP Kevin Millwood Atl |
| 14 | 161st | OF Jose Cruz Jr Tor |
| 15 | 176th | 3B Mike Lowell Fla |
| 16 | 185th | SP Todd Ritchie ChA |
| 17 | 200th | C Ben Davis Sea |
| 18 | 209th | SP Brandon Duckworth Phi |
| 19 | 224th | OF Kevin Millar Fla |
| 20 | 233rd | SP Jason Johnson Bal |
| 21 | 248th | 2B Marlon Anderson Phi |
| 22 | 257th | OF Terrence Long Oak |
| 23 | 272nd | SP Terry Adams Phi |
| 24 | 281st | OF Jeff Conine Bal |
| 25 | 296th | RP Willis Roberts Bal |
| 26 | 305th | SP Matt Clement ChN |
| 27 | 320th | RP Scott Strickland Mon |
| 28 | 329th | 2B Ricky Gutierrez Cle |
| 29 | 344th | OF Mark Quinn KC |