| Round | Overall | Player |
|---|---|---|
| 1 | 12th |
1B
Mo Vaughn
|
| 2 | 13th |
1B
Andres Galarraga
|
| 3 | 36th |
OF
Ellis Burks
|
| 4 | 37th |
OF
Brady Anderson
|
| 5 | 60th |
P
Charles Nagy
|
| 6 | 61st |
P
Andy Pettitte
|
| 7 | 84th |
OF
Marquis Grissom
|
| 8 | 85th |
3B
Scott Brosius
|
| 9 | 108th |
P
Wilson Alvarez
|
| 10 | 109th |
SS
Omar Vizquel
|
| 11 | 132nd |
2B
Mark McLemore
|
| 12 | 133rd |
P
Steve Karsay
|
| 13 | 156th |
P
Kenny Rogers
|
| 14 | 157th |
P
John Smiley
|
| 15 | 180th |
OF
Tony Gwynn
|
| 16 | 181st |
C
Mike Lieberthal
|
| 17 | 204th |
DH
Julio Franco
|
| 18 | 205th |
P
Chad Ogea
|
| 19 | 228th |
P
James Baldwin
|
| 20 | 229th |
P
Frank Rodriguez
|
| 21 | 252nd |
P
Rocky Coppinger
|
| 22 | 253rd |
OF
Danny Tartabull
|
| 23 | 276th |
3B
Craig Paquette
|
| 24 | 277th |
P
Tim Wakefield
|
| 25 | 300th |
P
John Wasdin
|
| 26 | 301st |
P
Bill Pulsipher
|
| 27 | 324th |
C
Kirt Manwaring
|