| Round | Overall | Player |
|---|---|---|
| 1 | 8th | 3B Albert Pujols StL |
| 2 | 17th | 1B Mo Vaughn NYN |
| 3 | 32nd | OF Magglio Ordonez ChA |
| 4 | 41st | OF Gary Sheffield Atl |
| 5 | 56th | SP Barry Zito Oak |
| 6 | 65th | 2B Alfonso Soriano NYA |
| 7 | 80th | SS Juan Uribe Col |
| 8 | 89th | SP Al Leiter NYN |
| 9 | 104th | 1B Paul Konerko ChA |
| 10 | 113th | OF Darin Erstad Ana |
| 11 | 128th | SP Eric Milton Min |
| 12 | 137th | OF Johnny Damon Bos |
| 13 | 152nd | SP Hideo Nomo LA |
| 14 | 161st | SP Cory Lidle Oak |
| 15 | 176th | OF Carlos Lee ChA |
| 16 | 185th | C Jason Varitek Bos |
| 17 | 200th | DH Ellis Burks Cle |
| 18 | 209th | SP Pedro Astacio NYN |
| 19 | 224th | SP Jason Johnson Bal |
| 20 | 233rd | SS Tony Womack Ari |
| 21 | 248th | C Todd Hundley ChN |
| 22 | 257th | SP Orlando Hernandez NYA |
| 23 | 272nd | 3B Travis Fryman Cle |
| 24 | 281st | SP Mark Redman Det |
| 25 | 296th | OF Greg Vaughn TB |
| 26 | 305th | OF David Justice Oak |
| 27 | 320th | SP Sterling Hitchcock NYA |
| 28 | 329th | 2B Ron Belliard Mil |
| 29 | 344th | SP Doug Davis Tex |