| Round | Overall | Player |
|---|---|---|
| 1 | 6th | 1B Jason Giambi NYA |
| 2 | 19th | OF Luis Gonzalez Ari |
| 3 | 30th | OF Lance Berkman Hou |
| 4 | 43rd | OF Ichiro Suzuki Sea |
| 5 | 54th | SP Mark Mulder Oak |
| 6 | 67th | 3B Aramis Ramirez Pit |
| 7 | 78th | C Jason Kendall Pit |
| 8 | 91st | RP Billy Koch Oak |
| 9 | 102nd | SP Joe Mays Min |
| 10 | 115th | SP Jon Lieber ChN |
| 11 | 126th | OF Garret Anderson Ana |
| 12 | 139th | SP Josh Beckett Fla |
| 13 | 150th | 2B Fernando Vina StL |
| 14 | 163rd | DH Edgar Martinez Sea |
| 15 | 174th | SS Alex Gonzalez ChN |
| 16 | 187th | RP Matt Anderson Det |
| 17 | 198th | SP Paul Abbott Sea |
| 18 | 211th | 3B Jose Valentin ChA |
| 19 | 222nd | SP Derek Lowe Bos |
| 20 | 235th | SS Omar Vizquel Cle |
| 21 | 246th | 2B Marlon Anderson Phi |
| 22 | 259th | C Mitch Meluskey Det |
| 23 | 270th | RP Paul Quantrill LA |
| 24 | 283rd | OF Bubba Trammell SD |
| 25 | 294th | SP Terry Adams Phi |
| 26 | 307th | DH Nick Johnson NYA |
| 27 | 318th | 1B Scott Hatteberg Oak |
| 28 | 331st | SP Carlos Hernandez Hou |
| 29 | 342nd | 3B Matt Williams Ari |