| Round | Overall | Player |
|---|---|---|
| 1 | 5th | OF Vladimir Guerrero Mon |
| 2 | 20th | 1B Carlos Delgado Tor |
| 3 | 29th | OF Andruw Jones Atl |
| 4 | 44th | 3B Aramis Ramirez Pit |
| 5 | 53rd | 1B Richie Sexson Mil |
| 6 | 68th | 2B Jose Vidro Mon |
| 7 | 77th | OF Preston Wilson Fla |
| 8 | 92nd | RP Ugueth Urbina Bos |
| 9 | 101st | SS Edgar Renteria StL |
| 10 | 116th | C Toby Hall TB |
| 11 | 125th | SP Aaron Sele Ana |
| 12 | 140th | SP Bud Smith StL |
| 13 | 149th | SP Ben Sheets Mil |
| 14 | 164th | SP Tony Armas Jr. Mon |
| 15 | 173rd | OF Bob Higginson Det |
| 16 | 188th | C Ben Petrick Col |
| 17 | 197th | SP Dustin Hermanson Bos |
| 18 | 212th | SP Kazuhisa Ishii LA |
| 19 | 221st | OF Geoff Jenkins Mil |
| 20 | 236th | 2B Ricky Gutierrez Cle |
| 21 | 245th | 3B Morgan Ensberg Hou |
| 22 | 260th | SP Jason Bere ChN |
| 23 | 269th | SP Matt Clement ChN |
| 24 | 284th | SS Adam Everett Hou |
| 25 | 293rd | SS Carlos Guillen Sea |
| 26 | 308th | SP Carl Pavano Mon |
| 27 | 317th | 1B J.T. Snow SF |
| 28 | 332nd | RP Mike Williams Pit |
| 29 | 341st | SP Josh Fogg Pit |