| Round | Overall | Player |
|---|---|---|
| 1 | 1st | SS Alex Rodriguez Tex |
| 2 | 24th | OF Magglio Ordonez ChA |
| 3 | 25th | 1B Carlos Delgado Tor |
| 4 | 48th | SP Kevin Brown LA |
| 5 | 49th | SP Freddy Garcia Sea |
| 6 | 72nd | OF Cliff Floyd Fla |
| 7 | 73rd | 2B Jeff Kent SF |
| 8 | 96th | RP Bob Wickman Cle |
| 9 | 97th | RP John Smoltz Atl |
| 10 | 120th | OF Carl Everett Tex |
| 11 | 121st | 3B Sean Burroughs SD |
| 12 | 144th | SP Aaron Sele Ana |
| 13 | 145th | SP Kevin Millwood Atl |
| 14 | 168th | OF Todd Hollandsworth Col |
| 15 | 169th | C Charles Johnson Fla |
| 16 | 192nd | SP Cory Lidle Oak |
| 17 | 193rd | SP David Wells NYA |
| 18 | 216th | 1B Doug Mientkiewicz Min |
| 19 | 217th | OF Ben Grieve TB |
| 20 | 240th | 3B Joe Randa KC |
| 21 | 241st | OF David Justice Oak |
| 22 | 264th | SP Paul Abbott Sea |
| 23 | 265th | C Ben Molina Ana |
| 24 | 288th | 2B Luis Rivas Min |
| 25 | 289th | SS David Eckstein Ana |
| 26 | 312th | RP Jose Jimenez Col |
| 27 | 313th | SP Chuck Finley Cle |
| 28 | 336th | C Brad Ausmus Hou |
| 29 | 337th | SP Kevin Jarvis SD |