| Round | Overall | Player |
|---|---|---|
| 1 | 5th | OF Vladimir Guerrero Mon |
| 2 | 20th | SS Nomar Garciaparra Bos |
| 3 | 29th | OF Bobby Abreu Phi |
| 4 | 44th | 3B Eric Chavez Oak |
| 5 | 53rd | SP Barry Zito Oak |
| 6 | 68th | SP Javier Vazquez Mon |
| 7 | 77th | OF Adam Dunn Cin |
| 8 | 92nd | 2B Jose Ortiz Col |
| 9 | 101st | SP Brad Penny Fla |
| 10 | 116th | RP Anthony Alford ChN |
| 11 | 125th | 1B Sean Casey Cin |
| 12 | 140th | SP Cory Lidle Oak |
| 13 | 149th | C Toby Hall TB |
| 14 | 164th | OF Carlos Lee ChA |
| 15 | 173rd | RP Eddie Guardado Min |
| 16 | 188th | SP Todd Ritchie ChA |
| 17 | 197th | 3B Sean Burroughs SD |
| 18 | 212th | C Mitch Meluskey Det |
| 19 | 221st | OF Bob Higginson Det |
| 20 | 236th | 1B Carlos Pena Oak |
| 21 | 245th | SS Felipe Lopez Tor |
| 22 | 260th | SP Danys Baez Cle |
| 23 | 269th | 2B Damion Easley Det |
| 24 | 284th | OF Robert Fick Det |
| 25 | 293rd | SS Jose Hernandez Mil |
| 26 | 308th | OF Juan Encarnacion Cin |
| 27 | 317th | SP Scott Erickson Bal |
| 28 | 332nd | SP Kyle Farnsworth ChN |
| 29 | 341st | RP Matt Mantei Ari |