| Round | Overall | Player |
|---|---|---|
| 1 | 4th | 1B Jason Giambi NYA |
| 2 | 21st | OF Luis Gonzalez Ari |
| 3 | 28th | SP Mark Mulder Oak |
| 4 | 45th | RP Kazuhiro Sasaki Sea |
| 5 | 52nd | 2B Bret Boone Sea |
| 6 | 69th | SP Chan Ho Park Tex |
| 7 | 76th | 3B Hank Blalock Tex |
| 8 | 93rd | OF Johnny Damon Bos |
| 9 | 100th | RP Anthony Alford ChN |
| 10 | 117th | OF Moises Alou ChN |
| 11 | 124th | SP Tom Glavine Atl |
| 12 | 141st | 3B Jose Valentin ChA |
| 13 | 148th | SP Pedro Astacio NYN |
| 14 | 165th | OF Garret Anderson Ana |
| 15 | 172nd | C Ramon Hernandez Oak |
| 16 | 189th | SS Tony Womack Ari |
| 17 | 196th | 3B Vinny Castilla Atl |
| 18 | 213th | SP Orlando Hernandez NYA |
| 19 | 220th | OF Terrence Long Oak |
| 20 | 237th | OF Matt Lawton Cle |
| 21 | 244th | SP Denny Neagle Col |
| 22 | 261st | 2B Frank Menechino Oak |
| 23 | 268th | SP Jason Johnson Bal |
| 24 | 285th | C Raul Casanova Mil |
| 25 | 292nd | DH Brad Fullmer Ana |
| 26 | 309th | SP Mark Prior ChN |
| 27 | 316th | SP Dave Burba Tex |
| 28 | 333rd | OF Doug Glanville Phi |
| 29 | 340th | 1B Scott Hatteberg Oak |