| Round | Overall | Player |
|---|---|---|
| 1 | 2nd | 1B Todd Helton Col |
| 2 | 23rd | 2B Roberto Alomar NYN |
| 3 | 26th | 3B Eric Chavez Oak |
| 4 | 47th | RP Keith Foulke ChA |
| 5 | 50th | SP Mark Mulder Oak |
| 6 | 71st | RP Billy Koch Oak |
| 7 | 74th | C Jason Kendall Pit |
| 8 | 95th | OF Jim Edmonds StL |
| 9 | 98th | OF Jeromy Burnitz NYN |
| 10 | 119th | OF Jose Cruz Jr Tor |
| 11 | 122nd | SP Brad Radke Min |
| 12 | 143rd | SP Kelvim Escobar Tor |
| 13 | 146th | SP Cory Lidle Oak |
| 14 | 167th | 3B Mike Lowell Fla |
| 15 | 170th | 1B Tino Martinez StL |
| 16 | 191st | OF Garret Anderson Ana |
| 17 | 194th | SS David Eckstein Ana |
| 18 | 215th | 2B Todd Walker Cin |
| 19 | 218th | SP Jason Bere ChN |
| 20 | 239th | C Todd Hundley ChN |
| 21 | 242nd | SP Jeff Suppan KC |
| 22 | 263rd | SP Ruben Quevedo Mil |
| 23 | 266th | SS Tony Womack Ari |
| 24 | 287th | SP Kevin Jarvis SD |
| 25 | 290th | OF Roger Cedeno NYN |
| 26 | 311th | SP James Baldwin Sea |
| 27 | 314th | SP Brandon Lyon Tor |
| 28 | 335th | SP Joey Hamilton Cin |
| 29 | 338th | OF Rondell White NYA |