| Round | Overall | Player |
|---|---|---|
| 1 | 3rd | SP Randy Johnson Ari |
| 2 | 22nd | OF Brian S. Giles Pit |
| 3 | 27th | SP Roy Oswalt Hou |
| 4 | 46th | OF Garret Anderson Ana |
| 5 | 51st | 1B Richie Sexson Mil |
| 6 | 70th | 2B Luis Castillo Fla |
| 7 | 75th | SP Jarrod Washburn Ana |
| 8 | 94th | RP Jason Isringhausen StL |
| 9 | 99th | 3B Tony Batista Bal |
| 10 | 118th | SS Edgar Renteria StL |
| 11 | 123rd | OF Moises Alou ChN |
| 12 | 142nd | C Toby Hall TB |
| 13 | 147th | 1B John Olerud Sea |
| 14 | 166th | OF Jacque Jones Min |
| 15 | 171st | SP Rick Reed Min |
| 16 | 190th | SP Brad Penny Fla |
| 17 | 195th | 3B Joe Randa KC |
| 18 | 214th | SP Kirk Rueter SF |
| 19 | 219th | OF Steve Finley Ari |
| 20 | 238th | SP Kenny Rogers Min |
| 21 | 243rd | SP Kyle Lohse Min |
| 22 | 262nd | SP Steve Trachsel NYN |
| 23 | 267th | SP Rick Helling Fla |
| 24 | 286th | 2B Placido Polanco Phi |
| 25 | 291st | C Brad Ausmus Hou |
| 26 | 310th | SS Juan Uribe Col |
| 27 | 315th | SP Aaron Sele Ana |
| 28 | 334th | OF Jeromy Burnitz LA |
| 29 | 339th | SP Jason Jennings Col |