| Round | Overall | Player |
|---|---|---|
| 1 | 6th | OF Manny Ramirez Bos |
| 2 | 19th | 1B Jim Thome Phi |
| 3 | 30th | OF Chipper Jones Atl |
| 4 | 43rd | OF Ken Griffey Jr Cin |
| 5 | 54th | OF Gary Sheffield Atl |
| 6 | 67th | 2B Roberto Alomar ChA |
| 7 | 78th | 3B Eric Hinske Tor |
| 8 | 91st | C Paul Lo Duca LA |
| 9 | 102nd | SS Omar Vizquel Cle |
| 10 | 115th | SP Woody Williams StL |
| 11 | 126th | SP Al Leiter NYN |
| 12 | 139th | SP Vicente Padilla Phi |
| 13 | 150th | SP Russ Ortiz Atl |
| 14 | 163rd | RP Jose Jimenez Col |
| 15 | 174th | C Benito Santiago SF |
| 16 | 187th | SP Andy Ashby LA |
| 17 | 198th | SP Paul Byrd Atl |
| 18 | 211th | DH Ellis Burks Cle |
| 19 | 222nd | SS Cristian Guzman Min |
| 20 | 235th | 1B David Ortiz Bos |
| 21 | 246th | OF Carl Everett ChA |
| 22 | 259th | RP Brandon Villafuerte SD |
| 23 | 270th | 2B Mark Ellis Oak |
| 24 | 283rd | 3B Fernando Tatis Mon |
| 25 | 294th | SP Shane Reynolds Atl |
| 26 | 307th | SP Jason Simontacchi StL |
| 27 | 318th | SP Josh Fogg Pit |
| 28 | 331st | RP Vladimir Nunez Fla |
| 29 | 342nd | OF Danny Bautista Ari |