| Round | Overall | Player |
|---|---|---|
| 1 | 4th | OF Manny Ramirez Bos |
| 2 | 21st | 1B Jim Thome Phi |
| 3 | 28th | OF Pat Burrell Phi |
| 4 | 45th | SP Matt Morris StL |
| 5 | 52nd | SP Mark Prior ChN |
| 6 | 69th | RP Armando Benitez Sea |
| 7 | 76th | 1B Richie Sexson Mil |
| 8 | 93rd | OF Torii Hunter Min |
| 9 | 100th | RP Jose Mesa Phi |
| 10 | 117th | SS Jimmy Rollins Phi |
| 11 | 124th | OF Jacque Jones Min |
| 12 | 141st | 3B Adrian Beltre LA |
| 13 | 148th | SP Matt Clement ChN |
| 14 | 165th | RP Jose Jimenez Col |
| 15 | 172nd | SP Hideo Nomo LA |
| 16 | 189th | SP Elmer Dessens Ari |
| 17 | 196th | SP Cory Lidle Tor |
| 18 | 213th | 2B Mark Ellis Oak |
| 19 | 220th | SP Kyle Lohse Min |
| 20 | 237th | C Damian Miller ChN |
| 21 | 244th | 3B Sean Burroughs SD |
| 22 | 261st | 2B Placido Polanco Phi |
| 23 | 268th | 1B Scott Hatteberg Oak |
| 24 | 285th | C Ben Molina Ana |
| 25 | 292nd | OF Ben Grieve TB |
| 26 | 309th | SS Royce Clayton Mil |
| 27 | 316th | OF Craig Biggio Hou |
| 28 | 333rd | SP Ryan Franklin Sea |
| 29 | 340th | SP Jason Marquis Atl |