| Round | Overall | Player |
|---|---|---|
| 1 | 8th | SP Randy Johnson Ari |
| 2 | 17th | OF Shawn Green LA |
| 3 | 32nd | OF Bobby Abreu Phi |
| 4 | 41st | SP Tim Hudson Oak |
| 5 | 56th | SP Derek Lowe Bos |
| 6 | 65th | SP Wade Miller Hou |
| 7 | 80th | 3B Aramis Ramirez ChN |
| 8 | 89th | OF Cliff Floyd NYN |
| 9 | 104th | 2B Aaron Boone NYA |
| 10 | 113th | RP Kelvim Escobar Tor |
| 11 | 128th | RP Matt Mantei Ari |
| 12 | 137th | 1B Aubrey Huff TB |
| 13 | 152nd | DH Erubiel Durazo Oak |
| 14 | 161st | C Mike Lieberthal Phi |
| 15 | 176th | SS Jose Valentin ChA |
| 16 | 185th | 3B Corey Koskie Min |
| 17 | 200th | SP Tomo Ohka Mon |
| 18 | 209th | OF Brad Wilkerson Mon |
| 19 | 224th | SP Ben Sheets Mil |
| 20 | 233rd | 2B Brandon Phillips Cle |
| 21 | 248th | 1B Robert Fick Atl |
| 22 | 257th | SS Julio Lugo TB |
| 23 | 272nd | C Ramon Hernandez Oak |
| 24 | 281st | SP Jason Simontacchi StL |
| 25 | 296th | OF Matt Lawton Cle |
| 26 | 305th | OF Carl Everett ChA |
| 27 | 320th | SP Runelvys Hernandez KC |
| 28 | 329th | 1B Doug Mientkiewicz Min |
| 29 | 344th | DH Nick Johnson NYA |