| Round | Overall | Player |
|---|---|---|
| 1 | 11th | 1B Todd Helton Col |
| 2 | 14th | OF Lance Berkman Hou |
| 3 | 35th | 2B Bret Boone Sea |
| 4 | 38th | 3B Eric Hinske Tor |
| 5 | 59th | OF Ichiro Suzuki Sea |
| 6 | 62nd | OF Andruw Jones Atl |
| 7 | 83rd | DH Frank Thomas ChA |
| 8 | 86th | 3B Mark Teixeira Tex |
| 9 | 107th | RP Kazuhiro Sasaki Sea |
| 10 | 110th | SP Joel Pineiro Sea |
| 11 | 131st | C Charles Johnson Col |
| 12 | 134th | SP Mike Hampton Atl |
| 13 | 155th | OF Richard Hidalgo Hou |
| 14 | 158th | SP Josh Fogg Pit |
| 15 | 179th | SP John Lackey Ana |
| 16 | 182nd | RP Byung-Hyun Kim Bos |
| 17 | 203rd | SS Orlando Cabrera Mon |
| 18 | 206th | SP Jose Contreras NYA |
| 19 | 227th | SP Kevin Appier KC |
| 20 | 230th | SP Orlando Hernandez Mon |
| 21 | 251st | SS Chris Woodward Tor |
| 22 | 254th | C Benito Santiago SF |
| 23 | 275th | OF J.D. Drew StL |
| 24 | 278th | 2B Jerry Hairston Jr. Bal |
| 25 | 299th | OF Jeromy Burnitz LA |
| 26 | 302nd | SP Ismael Valdez Tex |
| 27 | 323rd | SP Pedro Astacio NYN |
| 28 | 326th | 1B Mike Kinkade LA |
| 29 | 347th | SP Gil Meche Sea |