| Round | Overall | Player |
|---|---|---|
| 1 | 10th | 1B Todd Helton Col |
| 2 | 15th | SS Nomar Garciaparra Bos |
| 3 | 34th | OF Carlos Beltran KC |
| 4 | 39th | SP Tim Hudson Oak |
| 5 | 58th | OF Gary Sheffield Atl |
| 6 | 63rd | 2B Ray Durham SF |
| 7 | 82nd | SP Wade Miller Hou |
| 8 | 87th | OF Raul Ibanez KC |
| 9 | 106th | SP Matt Clement ChN |
| 10 | 111th | SP Hideo Nomo LA |
| 11 | 130th | OF Shannon Stewart Min |
| 12 | 135th | 3B David Bell Phi |
| 13 | 154th | 1B Aubrey Huff TB |
| 14 | 159th | SP Jeff Weaver NYA |
| 15 | 178th | OF Darin Erstad Ana |
| 16 | 183rd | SS Rafael Furcal Atl |
| 17 | 202nd | SP Cory Lidle Tor |
| 18 | 207th | SP John Lackey Ana |
| 19 | 226th | SP Rafael Soriano Sea |
| 20 | 231st | SP Darren Dreifort LA |
| 21 | 250th | 3B Sean Burroughs SD |
| 22 | 255th | 2B Orlando Hudson Tor |
| 23 | 274th | DH Brad Fullmer Ana |
| 24 | 279th | OF Kenny Lofton ChN |
| 25 | 298th | C Einar Diaz Tex |
| 26 | 303rd | SP Eric Milton Min |
| 27 | 322nd | SP Chris Carpenter StL |
| 28 | 327th | C Brad Ausmus Hou |
| 29 | 346th | OF Dmitri Young Det |