| Round | Overall | Player |
|---|---|---|
| 1 | 11th | 2B Alfonso Soriano NYA |
| 2 | 14th | 1B Todd Helton Col |
| 3 | 35th | 1B Jeff Bagwell Hou |
| 4 | 38th | C Ivan Rodriguez Fla |
| 5 | 59th | RP Robb Nen SF |
| 6 | 62nd | OF Luis Gonzalez Ari |
| 7 | 83rd | OF Preston Wilson Col |
| 8 | 86th | OF Ken Griffey Jr Cin |
| 9 | 107th | RP Mike Williams Phi |
| 10 | 110th | SP Russ Ortiz Atl |
| 11 | 131st | C Mike Lieberthal Phi |
| 12 | 134th | 3B Joe Crede ChA |
| 13 | 155th | SP Livan Hernandez Mon |
| 14 | 158th | OF Mike Cameron Sea |
| 15 | 179th | SP Cory Lidle Tor |
| 16 | 182nd | 3B Mark Teixeira Tex |
| 17 | 203rd | SS Chris Woodward Tor |
| 18 | 206th | RP Jorge Julio Bal |
| 19 | 227th | SP Ryan Dempster Cin |
| 20 | 230th | SP Kazuhisa Ishii LA |
| 21 | 251st | 3B Hank Blalock Tex |
| 22 | 254th | SP Darren Dreifort LA |
| 23 | 275th | 2B Orlando Hudson Tor |
| 24 | 278th | SP Mark Redman Fla |
| 25 | 299th | SP Andy Ashby LA |
| 26 | 302nd | 1B Sean Casey Cin |
| 27 | 323rd | RP Trevor Hoffman SD |
| 28 | 326th | SS Barry Larkin Cin |
| 29 | 347th | OF Kenny Lofton ChN |