| Round | Overall | Player |
|---|---|---|
| 1 | 5th | OF Vladimir Guerrero Mon |
| 2 | 20th | 3B Eric Chavez Oak |
| 3 | 29th | 1B Carlos Delgado Tor |
| 4 | 44th | C Ivan Rodriguez Fla |
| 5 | 53rd | SP Matt Morris StL |
| 6 | 68th | RP Armando Benitez Sea |
| 7 | 77th | OF Gary Sheffield Atl |
| 8 | 92nd | OF Austin Kearns Cin |
| 9 | 101st | SS Jimmy Rollins Phi |
| 10 | 116th | SP Josh Beckett Fla |
| 11 | 125th | SP Ramon Ortiz Ana |
| 12 | 140th | OF Carlos Lee ChA |
| 13 | 149th | SP Joel Pineiro Sea |
| 14 | 164th | RP Scott Williamson Bos |
| 15 | 173rd | SP Brett Myers Phi |
| 16 | 188th | SP Tony Armas Jr. Mon |
| 17 | 197th | 2B Todd Walker Bos |
| 18 | 212th | SP Kazuhisa Ishii LA |
| 19 | 221st | OF Tim Salmon Ana |
| 20 | 236th | SP Cory Lidle Tor |
| 21 | 245th | OF Brad Wilkerson Mon |
| 22 | 260th | 2B Mark Ellis Oak |
| 23 | 269th | DH Nick Johnson NYA |
| 24 | 284th | SS Carlos Guillen Sea |
| 25 | 293rd | 3B Joe Randa KC |
| 26 | 308th | C Brad Ausmus Hou |
| 27 | 317th | SP Pedro Astacio NYN |
| 28 | 332nd | 1B Scott Hatteberg Oak |
| 29 | 341st | 3B Ty Wigginton NYN |