| Round | Overall | Player |
|---|---|---|
| 1 | 8th | OF Albert Pujols StL |
| 2 | 17th | SS Nomar Garciaparra Bos |
| 3 | 32nd | SP Mark Mulder Oak |
| 4 | 41st | OF Ken Griffey Jr Cin |
| 5 | 56th | SP Kerry Wood ChN |
| 6 | 65th | 1B Richie Sexson Mil |
| 7 | 80th | SP Freddy Garcia Sea |
| 8 | 89th | SP Javier Vazquez Mon |
| 9 | 104th | OF Preston Wilson Col |
| 10 | 113th | SP Vicente Padilla Phi |
| 11 | 128th | SP Ben Sheets Mil |
| 12 | 137th | 3B Hank Blalock Tex |
| 13 | 152nd | C Michael Barrett Mon |
| 14 | 161st | OF Juan Encarnacion Fla |
| 15 | 176th | SP John Lackey Ana |
| 16 | 185th | 1B Travis Hafner Cle |
| 17 | 200th | OF J.D. Drew StL |
| 18 | 209th | 2B Adam Kennedy Ana |
| 19 | 224th | SP Ryan Dempster Cin |
| 20 | 233rd | 3B David Bell Phi |
| 21 | 248th | 2B Luis Rivas Min |
| 22 | 257th | OF Corey Patterson ChN |
| 23 | 272nd | SP Jose Contreras NYA |
| 24 | 281st | C Jason LaRue Cin |
| 25 | 296th | SP Horacio Ramirez Atl |
| 26 | 305th | DH Matthew LeCroy Min |
| 27 | 320th | OF Geoff Jenkins Mil |
| 28 | 329th | SS Jack Wilson Pit |
| 29 | 344th | SP Runelvys Hernandez KC |