| Round | Overall | Player |
|---|---|---|
| 1 | 10th | OF Manny Ramirez Bos |
| 2 | 15th | 1B Richie Sexson Ari |
| 3 | 34th | OF Lance Berkman Hou |
| 4 | 39th | 3B Troy Glaus Ana |
| 5 | 58th | SP Roy Oswalt Hou |
| 6 | 63rd | SP Matt Morris StL |
| 7 | 82nd | RP Eddie Guardado Sea |
| 8 | 87th | RP Trevor Hoffman SD |
| 9 | 106th | 1B Eric Hinske Tor |
| 10 | 111th | SP Mark Buehrle ChA |
| 11 | 130th | OF Hideki Matsui NYA |
| 12 | 135th | SP Odalis Perez LA |
| 13 | 154th | SS Angel Berroa KC |
| 14 | 159th | SP Al Leiter NYN |
| 15 | 178th | SP David Wells SD |
| 16 | 183rd | SP Kyle Lohse Min |
| 17 | 202nd | OF Jody Gerut Cle |
| 18 | 207th | C Toby Hall TB |
| 19 | 226th | SP Steve Trachsel NYN |
| 20 | 231st | SP John Thomson Atl |
| 21 | 250th | 1B Hee Seop Choi LA |
| 22 | 255th | 2B Mark Grudzielanek ChN |
| 23 | 274th | 2B Aaron Miles Col |
| 24 | 279th | 3B Sean Burroughs SD |
| 25 | 298th | OF Tim Salmon Ana |
| 26 | 303rd | SS Chris Woodward Tor |
| 27 | 322nd | C Michael Barrett ChN |
| 28 | 327th | 1B Ken Harvey KC |
| 29 | 346th | OF Alex Escobar Cle |