| Round | Overall | Player |
|---|---|---|
| 1 | 1st | 3B Alex Rodriguez NYA |
| 2 | 24th | 1B Richie Sexson Ari |
| 3 | 25th | RP Eric Gagne LA |
| 4 | 48th | SS Edgar Renteria StL |
| 5 | 49th | SP Javier Vazquez NYA |
| 6 | 72nd | SP Matt Morris StL |
| 7 | 73rd | 1B Rafael Palmeiro Bal |
| 8 | 96th | OF Pat Burrell Phi |
| 9 | 97th | OF Miguel Cabrera Fla |
| 10 | 120th | SP Carlos Zambrano ChN |
| 11 | 121st | RP Armando Benitez Fla |
| 12 | 144th | OF Austin Kearns Cin |
| 13 | 145th | 2B Luis Castillo Fla |
| 14 | 168th | OF Rocco Baldelli TB |
| 15 | 169th | SP Mike Hampton Atl |
| 16 | 192nd | SP Brian Lawrence SD |
| 17 | 193rd | SP David Wells SD |
| 18 | 216th | C A.J. Pierzynski SF |
| 19 | 217th | OF Trot Nixon Bos |
| 20 | 240th | SP Jeff Weaver LA |
| 21 | 241st | RP Ugueth Urbina Det |
| 22 | 264th | 2B Mark Loretta SD |
| 23 | 265th | C Toby Hall TB |
| 24 | 288th | SP Ramon Ortiz Ana |
| 25 | 289th | 3B Adrian Beltre LA |
| 26 | 312th | OF Jason Bay Pit |
| 27 | 313th | SS Royce Clayton Col |
| 28 | 336th | 1B Adam LaRoche Atl |
| 29 | 337th | OF Marquis Grissom SF |