| Round | Overall | Player |
|---|---|---|
| 1 | 4th | OF Vladimir Guerrero Ana |
| 2 | 21st | OF Magglio Ordonez ChA |
| 3 | 28th | OF Brian S. Giles SD |
| 4 | 45th | SP Roy Oswalt Hou |
| 5 | 52nd | SP Mike Mussina NYA |
| 6 | 69th | SS Orlando Cabrera Bos |
| 7 | 76th | SP Matt Morris StL |
| 8 | 93rd | 1B Frank Thomas ChA |
| 9 | 100th | OF Dmitri Young Det |
| 10 | 117th | RP Joe Borowski ChN |
| 11 | 124th | 3B Corey Koskie Min |
| 12 | 141st | SP Shawn Chacon Col |
| 13 | 148th | C Jason Kendall Pit |
| 14 | 165th | SP Freddy Garcia ChA |
| 15 | 172nd | SP Jerome Williams SF |
| 16 | 189th | SP Aquilino Lopez Tor |
| 17 | 196th | SP Jeremy Affeldt KC |
| 18 | 213th | SP David Wells SD |
| 19 | 220th | 3B Sean Burroughs SD |
| 20 | 237th | 2B Roberto Alomar ChA |
| 21 | 244th | SP Rodrigo Lopez Bal |
| 22 | 261st | OF Jermaine Dye Oak |
| 23 | 268th | 1B Hee Seop Choi LA |
| 24 | 285th | C Benito Santiago KC |
| 25 | 292nd | SP Jae Weong Seo NYN |
| 26 | 309th | SS Adam Everett Hou |
| 27 | 316th | SP Rafael Soriano Sea |
| 28 | 333rd | 2B Mark Grudzielanek ChN |
| 29 | 340th | OF Darin Erstad Ana |