| Round | Overall | Player |
|---|---|---|
| 1 | 5th | 1B Todd Helton Col |
| 2 | 20th | 1B Richie Sexson Ari |
| 3 | 29th | SP Roy Halladay Tor |
| 4 | 44th | SS Edgar Renteria StL |
| 5 | 53rd | SP Jason Schmidt SF |
| 6 | 68th | OF Richard Hidalgo NYN |
| 7 | 77th | OF Luis Gonzalez Ari |
| 8 | 92nd | OF Corey Patterson ChN |
| 9 | 101st | SP Jamie Moyer Sea |
| 10 | 116th | 2B Adam Kennedy Ana |
| 11 | 125th | SP Joel Pineiro Sea |
| 12 | 140th | SP Vicente Padilla Phi |
| 13 | 149th | 1B Shea Hillenbrand Ari |
| 14 | 164th | C A.J. Pierzynski SF |
| 15 | 173rd | SP Brad Radke Min |
| 16 | 188th | SP John Thomson Atl |
| 17 | 197th | OF Carl Crawford TB |
| 18 | 212th | SP Tim Wakefield Bos |
| 19 | 221st | OF Raul Mondesi Ana |
| 20 | 236th | 3B Desi Relaford KC |
| 21 | 245th | SP Miguel Batista Tor |
| 22 | 260th | SS Carlos Guillen Det |
| 23 | 269th | C Ben Molina Ana |
| 24 | 284th | 3B Casey Blake Cle |
| 25 | 293rd | SP Kurt Ainsworth Bal |
| 26 | 308th | SP Kirk Rueter SF |
| 27 | 317th | SP Jimmy Gobble KC |
| 28 | 332nd | OF Matt Stairs KC |
| 29 | 341st | RP Jose Mesa Pit |