| Round | Overall | Player |
|---|---|---|
| 1 | 1st | 3B Alex Rodriguez NYA |
| 2 | 24th | SS Nomar Garciaparra ChN |
| 3 | 25th | 1B Richie Sexson Ari |
| 4 | 48th | SP Roy Oswalt Hou |
| 5 | 49th | SP Jason Schmidt SF |
| 6 | 72nd | OF Shawn Green LA |
| 7 | 73rd | SP Kevin Millwood Phi |
| 8 | 96th | RP Trevor Hoffman SD |
| 9 | 97th | 1B Mark Teixeira Tex |
| 10 | 120th | SS Mike Young Tex |
| 11 | 121st | C Mike Lieberthal Phi |
| 12 | 144th | RP Jorge Julio Bal |
| 13 | 145th | OF Geoff Jenkins Mil |
| 14 | 168th | OF Larry Walker StL |
| 15 | 169th | SP Brad Penny LA |
| 16 | 192nd | OF Carl Crawford TB |
| 17 | 193rd | RP Joe Nathan Min |
| 18 | 216th | 1B Paul Konerko ChA |
| 19 | 217th | SP Jeremy Affeldt KC |
| 20 | 240th | OF Milton Bradley LA |
| 21 | 241st | SP Rich Harden Oak |
| 22 | 264th | 3B D'Angelo Jimenez Cin |
| 23 | 265th | SP Tim Redding Hou |
| 24 | 288th | SS Julio Lugo TB |
| 25 | 289th | 2B Luis Rivas Min |
| 26 | 312th | C Robby Hammock Ari |
| 27 | 313th | SP Edwin Jackson LA |
| 28 | 336th | SP Jon Garland ChA |
| 29 | 337th | SP Darrell May KC |