| Round | Overall | Player |
|---|---|---|
| 1 | 4th | 2B Alfonso Soriano Tex |
| 2 | 21st | OF Magglio Ordonez ChA |
| 3 | 28th | SP Randy Johnson Ari |
| 4 | 45th | RP Mariano Rivera NYA |
| 5 | 52nd | SP Kevin Brown NYA |
| 6 | 69th | OF Garret Anderson Ana |
| 7 | 76th | OF Aubrey Huff TB |
| 8 | 93rd | RP Joe Borowski ChN |
| 9 | 100th | 3B Morgan Ensberg Hou |
| 10 | 117th | SP Roger Clemens Hou |
| 11 | 124th | 2B Kazuo Matsui NYN |
| 12 | 141st | SP Freddy Garcia ChA |
| 13 | 148th | OF Torii Hunter Min |
| 14 | 165th | 1B Phil Nevin SD |
| 15 | 172nd | RP Mike MacDougal KC |
| 16 | 189th | SP Brad Radke Min |
| 17 | 196th | C Charles Johnson Col |
| 18 | 213th | SP Kyle Lohse Min |
| 19 | 220th | 3B Joe Crede ChA |
| 20 | 237th | 2B Todd Walker ChN |
| 21 | 244th | OF Jacque Jones Min |
| 22 | 261st | 1B Hee Seop Choi LA |
| 23 | 268th | OF Jose Cruz Jr TB |
| 24 | 285th | C Michael Barrett ChN |
| 25 | 292nd | SS Alex Gonzalez Fla |
| 26 | 309th | SP Bronson Arroyo Bos |
| 27 | 316th | OF Tim Salmon Ana |
| 28 | 333rd | 1B Tino Martinez TB |
| 29 | 340th | OF Kenny Lofton NYA |