| Round | Overall | Player |
|---|---|---|
| 1 | 7th | SS Miguel Tejada Bal |
| 2 | 18th | 2B Bret Boone Sea |
| 3 | 31st | SP Tim Hudson Oak |
| 4 | 42nd | SP John Smoltz Atl |
| 5 | 55th | 1B Derrek Lee ChN |
| 6 | 66th | OF Carlos Lee ChA |
| 7 | 79th | RP Troy Percival Ana |
| 8 | 90th | 1B Frank Thomas ChA |
| 9 | 103rd | SP Russ Ortiz Atl |
| 10 | 114th | SP Jarrod Washburn Ana |
| 11 | 127th | OF Pat Burrell Phi |
| 12 | 138th | OF Jose Guillen Ana |
| 13 | 151st | SP Kelvim Escobar Ana |
| 14 | 162nd | 1B Shea Hillenbrand Ari |
| 15 | 175th | C Toby Hall TB |
| 16 | 186th | OF Bernie Williams NYA |
| 17 | 199th | SP Brian Lawrence SD |
| 18 | 210th | SP Gil Meche Sea |
| 19 | 223rd | C Ramon Castro Fla |
| 20 | 234th | OF Raul Mondesi Ana |
| 21 | 247th | 2B Adam Kennedy Ana |
| 22 | 258th | 3B Pedro Feliz SF |
| 23 | 271st | SS David Eckstein Ana |
| 24 | 282nd | 1B Lyle Overbay Mil |
| 25 | 295th | SP Kazuhisa Ishii LA |
| 26 | 306th | SP Rocky Biddle Mon |
| 27 | 319th | C Ben Molina Ana |
| 28 | 330th | OF Darin Erstad Ana |
| 29 | 343rd | 3B Ty Wigginton Pit |