| Round | Overall | Player |
|---|---|---|
| 1 | 1st | 1B Albert Pujols StL |
| 2 | 24th | OF Gary Sheffield NYA |
| 3 | 25th | 3B Aramis Ramirez ChN |
| 4 | 48th | OF Jim Edmonds StL |
| 5 | 49th | SS Edgar Renteria Bos |
| 6 | 72nd | SP Kerry Wood ChN |
| 7 | 73rd | SP Mike Mussina NYA |
| 8 | 96th | SP Bartolo Colon LAA |
| 9 | 97th | OF Ichiro Suzuki Sea |
| 10 | 120th | 1B Jeff Bagwell Hou |
| 11 | 121st | OF Corey Patterson ChN |
| 12 | 144th | RP Eddie Guardado Sea |
| 13 | 145th | RP Danny Graves NYN |
| 14 | 168th | SP Kevin Brown NYA |
| 15 | 169th | SP Kevin Millwood Cle |
| 16 | 192nd | 2B Kazuo Matsui NYN |
| 17 | 193rd | C Paul Lo Duca Fla |
| 18 | 216th | RP Chad Cordero Was |
| 19 | 217th | SP Jeff Suppan StL |
| 20 | 240th | SP Erik Bedard Bal |
| 21 | 241st | OF Matt Lawton NYA |
| 22 | 264th | C Michael Barrett ChN |
| 23 | 265th | 2B Todd Walker ChN |
| 24 | 288th | SS David Eckstein StL |
| 25 | 289th | OF Mike Cameron NYN |
| 26 | 312th | SP Mark Redman Pit |
| 27 | 313th | 3B Joe Crede ChA |
| 28 | 336th | SP Aaron Harang Cin |
| 29 | 337th | SP Zach Day Col |