| Round | Overall | Player |
|---|---|---|
| 1 | 3rd | OF Vladimir Guerrero LAA |
| 2 | 22nd | SP Jason Schmidt SF |
| 3 | 27th | SP Tim Hudson Atl |
| 4 | 46th | SP Mark Prior ChN |
| 5 | 51st | RP Francisco Rodriguez LAA |
| 6 | 70th | 1B Paul Konerko ChA |
| 7 | 75th | 2B Jeff Kent LAD |
| 8 | 94th | RP Jason Isringhausen StL |
| 9 | 99th | SP Oliver Perez Pit |
| 10 | 118th | C Jason Varitek Bos |
| 11 | 123rd | SS Carlos Guillen Det |
| 12 | 142nd | 3B Casey Blake Cle |
| 13 | 147th | OF Larry Walker StL |
| 14 | 166th | SP Jon Lieber Phi |
| 15 | 171st | OF Jeromy Burnitz ChN |
| 16 | 190th | 3B Dallas McPherson LAA |
| 17 | 195th | 1B Carlos Pena Det |
| 18 | 214th | 3B Corey Koskie Tor |
| 19 | 219th | SP Wade Miller Bos |
| 20 | 238th | SP Jeremy Affeldt KC |
| 21 | 243rd | 1B Dmitri Young Det |
| 22 | 262nd | OF Alexis Rios Tor |
| 23 | 267th | 2B Ron Belliard Cle |
| 24 | 286th | SP Tomo Ohka Mil |
| 25 | 291st | SP Paul Wilson Cin |
| 26 | 310th | OF Darin Erstad LAA |
| 27 | 315th | SS Cristian Guzman Was |
| 28 | 334th | DH Shea Hillenbrand Tor |
| 29 | 339th | SP Chin-Hui Tsao Col |