| Round | Overall | Player |
|---|---|---|
| 1 | 5th | SS Miguel Tejada Bal |
| 2 | 20th | OF Miguel Cabrera Fla |
| 3 | 29th | RP Mariano Rivera NYA |
| 4 | 44th | 3B Troy Glaus Ari |
| 5 | 53rd | SP Mark Mulder StL |
| 6 | 68th | RP Francisco Cordero Tex |
| 7 | 77th | 1B Jeff Bagwell Hou |
| 8 | 92nd | SP Barry Zito Oak |
| 9 | 101st | OF Ichiro Suzuki Sea |
| 10 | 116th | SP Dontrelle Willis Fla |
| 11 | 125th | OF Moises Alou SF |
| 12 | 140th | OF Jason Lane Hou |
| 13 | 149th | RP Eddie Guardado Sea |
| 14 | 164th | 1B Lyle Overbay Mil |
| 15 | 173rd | C Paul Lo Duca Fla |
| 16 | 188th | SP Noah Lowry SF |
| 17 | 197th | 2B Junior Spivey Was |
| 18 | 212th | OF Scott Podsednik ChA |
| 19 | 221st | SP Eric Milton Cin |
| 20 | 236th | SP Jerome Williams ChN |
| 21 | 245th | 3B Garrett Atkins Col |
| 22 | 260th | 2B Luis Castillo Fla |
| 23 | 269th | OF Wily Pena Cin |
| 24 | 284th | SP Cory Lidle Phi |
| 25 | 293rd | C Chris Snyder Ari |
| 26 | 308th | SS Adam Everett Hou |
| 27 | 317th | SP Brandon Backe Hou |
| 28 | 332nd | 1B Eric Hinske Tor |
| 29 | 341st | SP Edwin Jackson LAD |