| Round | Overall | Player |
|---|---|---|
| 1 | 11th | OF Bobby Abreu Phi |
| 2 | 14th | SP Randy Johnson NYA |
| 3 | 35th | SP Tim Hudson Atl |
| 4 | 38th | RP Brad Lidge Hou |
| 5 | 59th | SP Carlos Zambrano ChN |
| 6 | 62nd | RP Armando Benitez SF |
| 7 | 83rd | OF J.D. Drew LAD |
| 8 | 86th | OF Magglio Ordonez Det |
| 9 | 107th | OF Luis Gonzalez Ari |
| 10 | 110th | 1B Jason Giambi NYA |
| 11 | 131st | SP Odalis Perez LAD |
| 12 | 134th | C Jason Varitek Bos |
| 13 | 155th | 2B Ray Durham SF |
| 14 | 158th | SP Jeff Weaver LAD |
| 15 | 179th | 3B Casey Blake Cle |
| 16 | 182nd | 2B Kazuo Matsui NYN |
| 17 | 203rd | SS Khalil Greene SD |
| 18 | 206th | 1B Erubiel Durazo Oak |
| 19 | 227th | SP Woody Williams SD |
| 20 | 230th | RP Danys Baez TB |
| 21 | 251st | OF Lew Ford Min |
| 22 | 254th | SS Clint Barmes Col |
| 23 | 275th | SP Vicente Padilla Phi |
| 24 | 278th | 3B Jose Valentin LAD |
| 25 | 299th | SP Jamie Moyer Sea |
| 26 | 302nd | SP Joe Blanton Oak |
| 27 | 323rd | 1B Tino Martinez NYA |
| 28 | 326th | C Toby Hall TB |
| 29 | 347th | OF Darin Erstad LAA |