| Round | Overall | Player |
|---|---|---|
| 1 | 9th | OF Alfonso Soriano Tex |
| 2 | 16th | SP Curt Schilling Bos |
| 3 | 33rd | OF Carl Crawford TB |
| 4 | 40th | 3B Hank Blalock Tex |
| 5 | 57th | 1B Derrek Lee ChN |
| 6 | 64th | SP Mark Mulder StL |
| 7 | 81st | RP Guillermo Mota Fla |
| 8 | 88th | SS Jimmy Rollins Phi |
| 9 | 105th | C Mike Piazza NYN |
| 10 | 112th | RP Troy Percival Det |
| 11 | 129th | OF Larry Walker StL |
| 12 | 136th | SP Zack Greinke KC |
| 13 | 153rd | SP Doug Davis Mil |
| 14 | 160th | OF Trot Nixon Bos |
| 15 | 177th | OF Matt Holliday Col |
| 16 | 184th | SP Al Leiter NYA |
| 17 | 201st | 3B Pedro Feliz SF |
| 18 | 208th | SP Vicente Padilla Phi |
| 19 | 225th | OF Jason Lane Hou |
| 20 | 232nd | 1B Nick Johnson Was |
| 21 | 249th | SS Angel Berroa KC |
| 22 | 256th | SP Gavin Floyd Phi |
| 23 | 273rd | SP Nate Robertson Det |
| 24 | 280th | 2B Ruben Gotay KC |
| 25 | 297th | C Brian Schneider Was |
| 26 | 304th | SP Greg Aquino Ari |
| 27 | 321st | SP Dewon Brazelton TB |
| 28 | 328th | OF Nick Swisher Oak |
| 29 | 345th | SP Joe Blanton Oak |