| Round | Overall | Player |
|---|---|---|
| 1 | 11th | 3B Miguel Cabrera Fla |
| 2 | 14th | DH Travis Hafner Cle |
| 3 | 35th | 1B Lance Berkman Hou |
| 4 | 38th | OF Grady Sizemore Cle |
| 5 | 59th | RP Brad Lidge Hou |
| 6 | 62nd | RP Billy Wagner NYN |
| 7 | 83rd | SP Ben Sheets Mil |
| 8 | 86th | SP Josh Beckett Bos |
| 9 | 107th | OF Ichiro Suzuki Sea |
| 10 | 110th | SP Brett Myers Phi |
| 11 | 131st | SP Mark Prior ChN |
| 12 | 134th | OF Jermaine Dye ChA |
| 13 | 155th | SP Noah Lowry SF |
| 14 | 158th | SS Edgar Renteria Atl |
| 15 | 179th | 2B Robinson Cano NYA |
| 16 | 182nd | OF Shawn Green NYN |
| 17 | 203rd | DH Mike Piazza Oak |
| 18 | 206th | SP Bronson Arroyo Cin |
| 19 | 227th | SP Kenny Rogers Det |
| 20 | 230th | SS Carlos Guillen Det |
| 21 | 251st | SP Carl Pavano NYA |
| 22 | 254th | 1B Shea Hillenbrand LAA |
| 23 | 275th | 2B Luis Castillo Min |
| 24 | 278th | C Yorvit Torrealba Col |
| 25 | 299th | OF Delmon Young TB |
| 26 | 302nd | 3B Bill Mueller LAD |
| 27 | 323rd | OF Emil Brown KC |
| 28 | 326th | RP Joel Pineiro Bos |