| Round | Overall | Player |
|---|---|---|
| 1 | 8th | 1B Derrek Lee ChN |
| 2 | 17th | 3B Aramis Ramirez ChN |
| 3 | 32nd | OF Alfonso Soriano ChA |
| 4 | 41st | 1B Paul Konerko ChA |
| 5 | 56th | 2B Jorge Cantu TB |
| 6 | 65th | RP Francisco Rodriguez LAA |
| 7 | 80th | RP Billy Wagner NYN |
| 8 | 89th | SP Curt Schilling Bos |
| 9 | 104th | SP Brandon Webb Ari |
| 10 | 113th | OF Jonny Gomes TB |
| 11 | 128th | RP Bobby Jenks ChA |
| 12 | 137th | OF Kevin Mench Mil |
| 13 | 152nd | SP John Lackey LAA |
| 14 | 161st | C Kenji Johjima Sea |
| 15 | 176th | SP Roger Clemens Hou |
| 16 | 185th | OF Aaron Rowand Phi |
| 17 | 200th | SP Mike Mussina NYA |
| 18 | 209th | OF Jose Guillen Was |
| 19 | 224th | SS Juan Uribe ChA |
| 20 | 233rd | SP Rodrigo Lopez Col |
| 21 | 248th | SP Tim Wakefield Bos |
| 22 | 257th | C Brian McCann Atl |
| 23 | 272nd | 1B Ben Broussard Sea |
| 24 | 281st | RP Keith Foulke Cle |
| 25 | 296th | SP Brandon Backe Hou |
| 26 | 305th | 2B Junior Spivey StL |
| 27 | 320th | SS Craig Counsell Ari |
| 28 | 329th | OF Steve Finley SF |
| 29 | 344th | 3B Vinny Castilla Col |