| Round | Overall | Player |
|---|---|---|
| 1 | 6th | OF Manny Ramirez Bos |
| 2 | 19th | SS Miguel Tejada Bal |
| 3 | 30th | SP Carlos Zambrano ChN |
| 4 | 43rd | RP Mariano Rivera NYA |
| 5 | 54th | SP Felix Hernandez Sea |
| 6 | 67th | 3B Chad Tracy Ari |
| 7 | 78th | RP Chad Cordero Was |
| 8 | 91st | 1B Jason Giambi NYA |
| 9 | 102nd | SP Brett Myers Phi |
| 10 | 115th | OF Jeremy Hermida Fla |
| 11 | 126th | OF Jermaine Dye ChA |
| 12 | 139th | OF Josh Willingham Fla |
| 13 | 150th | OF Austin Kearns Was |
| 14 | 163rd | SP Chris Young SD |
| 15 | 174th | 2B Mark Ellis Oak |
| 16 | 187th | SP Erik Bedard Bal |
| 17 | 198th | SP Kris Benson Bal |
| 18 | 211th | 1B Conor Jackson Ari |
| 19 | 222nd | SP Kerry Wood ChN |
| 20 | 235th | SP Ervin Santana LAA |
| 21 | 246th | SP John Thomson Atl |
| 22 | 259th | SS Angel Berroa KC |
| 23 | 270th | SP Justin Verlander Det |
| 24 | 283rd | 2B Josh Barfield Cle |
| 25 | 294th | OF Matt Murton ChN |
| 26 | 307th | 3B Tony Batista Min |
| 27 | 318th | C Brian Schneider Was |
| 28 | 331st | OF Alexis Rios Tor |
| 29 | 342nd | RP Joe Borowski Cle |