| Round | Overall | Player |
|---|---|---|
| 1 | 5th | OF Manny Ramirez Bos |
| 2 | 20th | 1B Todd Helton Col |
| 3 | 29th | SP Roy Oswalt Hou |
| 4 | 44th | SP Roy Halladay Tor |
| 5 | 53rd | OF Ichiro Suzuki Sea |
| 6 | 68th | SP Jason Schmidt SF |
| 7 | 77th | 3B Adrian Beltre Sea |
| 8 | 92nd | OF Jim Edmonds StL |
| 9 | 101st | C Jason Varitek Bos |
| 10 | 116th | SP Mark Mulder StL |
| 11 | 125th | RP Trevor Hoffman SD |
| 12 | 140th | SS Edgar Renteria Atl |
| 13 | 149th | RP Jose Valverde Ari |
| 14 | 164th | 2B Ron Belliard StL |
| 15 | 173rd | SP Derek Lowe LAD |
| 16 | 188th | SP Rodrigo Lopez Col |
| 17 | 197th | OF Moises Alou SF |
| 18 | 212th | OF Luis Gonzalez Ari |
| 19 | 221st | SP Matt Clement Bos |
| 20 | 236th | C Ben Molina SF |
| 21 | 245th | DH Jose Vidro Was |
| 22 | 260th | SP John Thomson Atl |
| 23 | 269th | OF Garret Anderson LAA |
| 24 | 284th | SS Angel Berroa KC |
| 25 | 293rd | SP Kris Benson Bal |
| 26 | 308th | SP Brandon Backe Hou |
| 27 | 317th | SP David Wells SD |
| 28 | 332nd | 3B Bill Mueller LAD |
| 29 | 341st | OF Trot Nixon Bos |