| Round | Overall | Player |
|---|---|---|
| 1 | 3rd | 1B Mark Teixeira Tex |
| 2 | 22nd | OF Carlos Beltran NYN |
| 3 | 27th | 1B Ryan Howard Phi |
| 4 | 46th | C Joe Mauer Min |
| 5 | 51st | OF Vernon Wells Tor |
| 6 | 70th | 2B Felipe Lopez Was |
| 7 | 75th | SP Tim Hudson Atl |
| 8 | 94th | SP Josh Beckett Bos |
| 9 | 99th | 3B Chad Tracy Ari |
| 10 | 118th | OF Delmon Young TB |
| 11 | 123rd | 1B Mike Jacobs Fla |
| 12 | 142nd | RP Armando Benitez SF |
| 13 | 147th | OF Jonny Gomes TB |
| 14 | 166th | RP Mike Gonzalez Atl |
| 15 | 171st | SP Matt Morris SF |
| 16 | 190th | 2B Ian Kinsler Tex |
| 17 | 195th | SP Doug Davis Ari |
| 18 | 214th | SP Daniel Cabrera Bal |
| 19 | 219th | OF Josh Willingham Fla |
| 20 | 238th | 1B Chris Shelton Det |
| 21 | 243rd | SP Tom Glavine NYN |
| 22 | 262nd | 2B Mark Ellis Oak |
| 23 | 267th | SS Brandon Wood LAA |
| 24 | 286th | 3B Corey Koskie Mil |
| 25 | 291st | SP Jorge Sosa StL |
| 26 | 310th | SP Aaron Harang Cin |
| 27 | 315th | OF Corey Patterson Bal |
| 28 | 334th | SS Jack Wilson Pit |
| 29 | 339th | SP Ryan Madson Phi |