| Round | Overall | Player |
|---|---|---|
| 1 | 2nd | 3B Alex Rodriguez NYA |
| 2 | 23rd | C Joe Mauer Min |
| 3 | 26th | SS Derek Jeter NYA |
| 4 | 47th | RP Mariano Rivera NYA |
| 5 | 50th | SP Roy Halladay Tor |
| 6 | 71st | OF Ichiro Suzuki Sea |
| 7 | 74th | SP Justin Verlander Det |
| 8 | 95th | SP Jered Weaver LAA |
| 9 | 98th | OF Delmon Young Min |
| 10 | 119th | RP Bob Wickman Atl |
| 11 | 122nd | SP Matt Cain SF |
| 12 | 143rd | 2B Rickie Weeks Mil |
| 13 | 146th | 1B Adrian Gonzalez SD |
| 14 | 167th | OF Brian S. Giles SD |
| 15 | 170th | SP Kelvim Escobar LAA |
| 16 | 191st | SP Greg Maddux SD |
| 17 | 194th | 2B Josh Barfield Cle |
| 18 | 215th | SP Jason Jennings Hou |
| 19 | 218th | 3B Chad Tracy Ari |
| 20 | 239th | DH Mike Sweeney KC |
| 21 | 242nd | 1B Ryan Shealy KC |
| 22 | 263rd | C Chris Iannetta Col |
| 23 | 266th | OF Jonny Gomes TB |
| 24 | 287th | SS Omar Vizquel SF |
| 25 | 290th | SP Kenny Rogers Det |
| 26 | 311th | SP Ted Lilly ChN |
| 27 | 314th | SP Chad Billingsley LAD |
| 28 | 335th | SP Taylor Tankersley Fla |
| 29 | 338th | SP Esteban Loaiza LAD |