| Round | Overall | Player |
|---|---|---|
| 1 | 8th | 2B Chase Utley Phi |
| 2 | 17th | OF Carl Crawford TB |
| 3 | 32nd | OF Curtis Granderson Det |
| 4 | 41st | OF Melvin Upton TB |
| 5 | 56th | C Russell Martin LAD |
| 6 | 65th | SP Chien-Ming Wang NYA |
| 7 | 80th | SS Yunel Escobar Atl |
| 8 | 89th | RP Joe Nathan Min |
| 9 | 104th | 1B Todd Helton Col |
| 10 | 113th | SP James Shields TB |
| 11 | 128th | DH Gary Sheffield Det |
| 12 | 137th | 3B Troy Glaus StL |
| 13 | 152nd | RP Troy Percival TB |
| 14 | 161st | 1B Richie Sexson Sea |
| 15 | 176th | SP Matt Garza TB |
| 16 | 185th | OF Rick Ankiel StL |
| 17 | 200th | 3B Melvin Mora Bal |
| 18 | 209th | SS Jason Bartlett TB |
| 19 | 224th | C Brian Schneider NYN |
| 20 | 233rd | DH Frank Thomas Oak |
| 21 | 248th | OF Shane Victorino Phi |
| 22 | 257th | SP Boof Bonser Min |
| 23 | 272nd | SP Andrew Miller Fla |
| 24 | 281st | 2B Luis Castillo NYN |
| 25 | 296th | OF Jim Edmonds ChN |
| 26 | 305th | SP Kenny Rogers Det |
| 27 | 320th | OF Ryan Church NYN |
| 28 | 329th | SP Mark Prior SD |
| 29 | 344th | 2B Adam Kennedy StL |