| Round | Overall | Player |
|---|---|---|
| 1 | 2nd | C Mike Piazza LA |
| 2 | 23rd | 3B Chipper Jones Atl |
| 3 | 26th | P Mike Mussina Bal |
| 4 | 47th | 1B Rafael Palmeiro Bal |
| 5 | 50th | OF Steve Finley SD |
| 6 | 71st | P Andy Benes Ari |
| 7 | 74th | P Jeff Brantley StL |
| 8 | 95th | 2B Damion Easley Det |
| 9 | 98th | OF Bob Higginson Det |
| 10 | 119th | P Todd Stottlemyre StL |
| 11 | 122nd | OF Rondell White Mon |
| 12 | 143rd | SS Alex Gonzalez Tor |
| 13 | 146th | P Kevin Appier KC |
| 14 | 167th | P Jeff Montgomery KC |
| 15 | 170th | OF Ryan Klesko Atl |
| 16 | 191st | OF Mark Kotsay Fla |
| 17 | 194th | 2B Carlos Baerga NYN |
| 18 | 215th | 1B Brad Fullmer Mon |
| 19 | 218th | P Francisco Cordova Pit |
| 20 | 239th | P James Baldwin ChA |
| 21 | 242nd | C Eli Marrero StL |
| 22 | 263rd | 3B Ron Coomer Min |
| 23 | 266th | P Jaime Navarro ChA |
| 24 | 287th | P Esteban Loaiza Pit |
| 25 | 290th | OF Karim Garcia Ari |
| 26 | 311th | OF Greg Vaughn SD |