| Round | Overall | Player |
|---|---|---|
| 1 | 8th | 2B Robinson Cano NYA |
| 2 | 17th | SS Hanley Ramirez LAD |
| 3 | 32nd | OF Andrew McCutchen Pit |
| 4 | 41st | 1B Paul Konerko ChA |
| 5 | 56th | OF Hunter Pence SF |
| 6 | 65th | SP David Price TB |
| 7 | 80th | SP Josh Beckett LAD |
| 8 | 89th | SS Derek Jeter NYA |
| 9 | 104th | OF Carlos Beltran STL |
| 10 | 113th | SP Matt Garza ChN |
| 11 | 128th | DH Adam Dunn ChA |
| 12 | 137th | 1B Corey Hart Mil |
| 13 | 152nd | SP Tim Hudson Atl |
| 14 | 161st | RP Brandon League LAD |
| 15 | 176th | SP Anibal Sanchez Det |
| 16 | 185th | SP Derek Holland Tex |
| 17 | 200th | 2B Jemile Weeks Oak |
| 18 | 209th | SS Dee Strange-Gordon LAD |
| 19 | 224th | RP Jonathan Broxton Cin |
| 20 | 233rd | 3B Chase Headley SD |
| 21 | 248th | SP Brett Myers Cle |
| 22 | 257th | C Wilson Ramos Was |
| 23 | 272nd | 1B Bryan Lahair ChN |
| 24 | 281st | OF Matt Joyce TB |
| 25 | 296th | SP Ricky Nolasco Mia |
| 26 | 305th | RP Addison Reed ChA |
| 27 | 320th | C John Buck Mia |
| 28 | 329th | OF Cody Ross Ari |
| 29 | 344th | SP James Mcdonald Pit |