| Round | Overall | Player |
|---|---|---|
| 1 | 5th | 2B Robinson Cano Sea |
| 2 | 20th | 1B Adrian Gonzalez LAD |
| 3 | 29th | 3B Chase Headley SD |
| 4 | 44th | SP Gio Gonzalez Was |
| 5 | 53rd | SP Madison Bumgarner SF |
| 6 | 68th | SS Asdrubal Cabrera Cle |
| 7 | 77th | SP Mat Latos Cin |
| 8 | 92nd | SP Yovani Gallardo Mil |
| 9 | 101st | C Miguel Montero Ari |
| 10 | 116th | OF Hunter Pence SF |
| 11 | 125th | RP Joe Nathan Tex |
| 12 | 140th | 1B Adam LaRoche Was |
| 13 | 149th | RP Sergio Romo SF |
| 14 | 164th | OF Jayson Werth Was |
| 15 | 173rd | OF Angel Pagan SF |
| 16 | 188th | SP Wade Miley Ari |
| 17 | 197th | RP Glen Perkins Min |
| 18 | 212th | OF Chris Young Oak |
| 19 | 221st | OF Carlos Gomez Mil |
| 20 | 236th | SP Jason Hammel Bal |
| 21 | 245th | 3B Mike Young Phi |
| 22 | 260th | SP Hyun-Jin Ryu LAD |
| 23 | 269th | OF Coco Crisp Oak |
| 24 | 284th | SP Wei-Yin Chen Bal |
| 25 | 293rd | RP Santiago Casilla SF |
| 26 | 308th | 2B Brian Roberts NYA |
| 27 | 317th | 1B Justin Smoak Sea |
| 28 | 332nd | C Russell Martin Pit |
| 29 | 341st | SS Ruben Tejada NYN |